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GT21274

CSHL Arabidopsis genetrap mutant lines

Original: GT21274

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21274

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 426020 [Map]; Strand: c
      • AT2G01918.1 - [+] show detail - PsbQ-like 3
        Distance: -307; Region: promoter
      • AT2G01920.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: -32; Region: promoter
    Flanking Genome Sequence: GT21274 - 5-prime edge
    CTCCGGAGAC GCGTCTCCAC AACTTCATTT TTCGTCTCAT GACGATGTTT 
    TAGTTGTTGA TGTTTTGTAA TTATTCTACG AAGATGATTT GGTTATGATT
    TCAATTTAGA CTTTTAGTTG TTGTAACAAA ATTAGTTTCT TACTTTGAAA
    CATTTTTTGT CAAAACGCAA ATTGAGAGTT TTTAGTATCT TACGTGTTAC
    GTTATGTATC TGTAAATTAC AATTAGCAGC TTTGAGATAA TTCATATAAC
    AAACAAAAAA AATGAAAATT TGGCGGGTAG TTGTAAGTGT TATCTGCACT
    AGTTGACACG TGTTATCACT AGTGGCCGTT GGATTAATCT CTGGTTCTTA
    TCCTTGTGAT GAGGTTGGTT TGTTCAATGG TGCAGCTACT TTGTTTCATT
    GAAACGTGAA TACATGGCGA TTTCAAAGCC ACCACCACTA CATTTCACTT
    TCTTTCACAA TCAAGATTCT TCAATTGATA CATCGGATTC AAACTTAGCA
    CTTTCTATTG ATACATCTAG AAGACGAAGA GACGTTTTGC TCACAATTTC
    AGGTACACTA ATCCCTCAAC TGTT

AT2G01918.1

Model type
Protein coding
Short Description
PsbQ-like 3
Curator Summary
Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.
Computational Description
PsbQ-like 3 (PQL3); CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01920.1

Model type
Protein coding
Short Description
ENTH/VHS/GAT family protein
Computational Description
ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14686.1); Has 316 Blast hits to 316 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR