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GT21311

CSHL Arabidopsis genetrap mutant lines

Original: GT21311

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21311

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3225466 [Map]; Strand: w
      • AT5G10270.1 - [+] show detail - cyclin-dependent kinase C;1
        Distance: -701; Region: promoter
    Flanking Genome Sequence: GT21311 - 5-prime edge
    GGTGCGATAG GAACAGATTA CTCCTGAAGT GTTAGCGTGC TTATCACGCC 
    ATTTAACCGT GTACACGACC ATTCTGGTTC AAAGGAAGAA CGAGAACATT
    CGAATCTCGA CCAAACCCTA GATCTCGGTT TCTTTACCTA CAGGAAGACA
    CGATTCACTA TCTCCCTACT CATTGTCAAA CCCTAACATC GGCTATTGGT
    CCTAACTCCT AACTCACCCG ATTCAATTTA GGTTTCATGC TAACATCGGT
    GAAGGACGGT TATTTCGGAA GTTTGATTTT GGTGTGGGTA GGTCTAATTT
    TGGGTTTTGT GATTTCTAGG AAAATGTTTC TCTATGGTCA TTCACTTGAA
    TCAAACCCTA TACATAAATC TTCCCTTCTT TTGTTTCGTA TGGATGATAT
    TTCTTTTATC TCTGATGAAT CATGCTAGGT TTTTTTTCTT CTCACTCGAC

AT5G10270.1

Model type
Protein coding
Short Description
cyclin-dependent kinase C;1
Curator Summary
Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.
Computational Description
cyclin-dependent kinase C;1 (CDKC;1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to virus, leaf development; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin dependent kinase group C2 (TAIR:AT5G64960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR