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GT21336

CSHL Arabidopsis genetrap mutant lines

Original: GT21336

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21336

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 847559 [Map]; Strand: c
      • AT3G03540.1 - [+] show detail - non-specific phospholipase C5
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT21336 - 5-prime edge 
    GAAGGTTTTC CACGAAAGAC GATATTCATC TCACTCGACG AAGCTGGTTT 
    TACCTTTGGG ATTTATTACC AATGTTTTCC TACTACTCTC TTTTATAGGT 
    ATCTTAATAT TTTACGAGTT GCAAAAGATT TTAGTATTAT ATATTGCTTT 
    GCGATATTAA TCTTTATTAG TATTCTTTTG TGTTTGGTTT TTCAGGAATT 
    TGAGAAAACT CAAGTATTTG ACACGTTTCC ACGACTACGG ACTACAATTC 
    AAGAAAGATT GTAAAGAAGG GAATCTACCG AACTATGTTG TGGTTGAACA 
    ACGTTGGTAT GATCTATTGT TGAATCCCGC TAACGATGAT CATCCATCAC 
    ATGACGTCTC CGAAGGCCAA AAGCTCGTGA AAGAAGTTTA CGAGGCCTTG 
    AGATCGAGTC CTCAATGGAA TGAGATTTTA TTCATTATAA CATATGACGA 
    ACACGGTGGA TTCTACGACC ATGTCCCTAC TCCCCTCGAC GGAGTTCCTA 
    ATCCGGATGG TATCTTGGGA CCTCCACCGT ACAATTTTGA ATTTAACCGG 
    CTCGGCGTTA GGGTTCCGAC TTTCTTCATC TCTCTCGAC

AT3G03540.1

Model type
Protein coding
Short Description
non-specific phospholipase C5
Curator Summary
Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.
Computational Description
non-specific phospholipase C5 (NPC5); CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2077 Blast hits to 2037 proteins in 379 species: Archae - 32; Bacteria - 1720; Metazoa - 0; Fungi - 127; Plants - 154; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR