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GT21340

CSHL Arabidopsis genetrap mutant lines

Original: GT21340

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21340

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 215650 [Map]; Strand: c
      • AT4G00467.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT21340 - 5-prime edge 
    TGTCTCAATG GAAGAAGCTG ACCTATATCA AATTAAGAAT CTTGGACGAA 
    GAGCTCTTCA ATGATGGTGG ATTTGTCGGT GAAACCATGT GAGTTTTGCT 
    TGCTGAAACT GAAGTTAATG TGGTTTATCA TTAGCCATAT CACCTATCGT 
    ACCATCCTTT TGTTTGTGAC TCTTTTTGGT ACAGAATTCA TCTCACTCGA 
    C

AT4G00467.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR