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GT21345

CSHL Arabidopsis genetrap mutant lines

Original: GT21345

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21345

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30353044 [Map]; Strand: w
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: -836; Region: promoter
    Flanking Genome Sequence: GT21345 - 5-prime edge
    CGTTATTCCT TTTCTATCTA TAACTCTTTA GAATCAAAAT TAAAACACTA 
    ATTTATTGCT TTGTCCTCAC AATCGTATGA CTATGAATTG AAGTGTCTTG
    GAACAAGATT TAATTATAAT TATTTCTCTA AGGTATAAGT TTCTTGAACC
    TTATTCGCTT TTATAACTTA TGCCCAAGTA TACATACCCT TTTCTAAGTT
    TTATAGAATA AGTAGAGGAG TTAGCTAGTG GTCTCGGTTT AGATTAAAAA
    ACTATGTGTA GATATAGATA AGAGGTCTAT ATATCCGGAG AATATATACC
    TCCTAAGACT AAGATAGTCA TTTAAATTTC GTCCATTCCC TTCAAGTTAA
    ATCACATTAT GTCATAGAAT AAAAATTTGG TACAGTGAGA ACGCAGATAT
    AATCGAAACA AAACAATAAA TCATGAGAAT GTATTAATGC GTGTGGTGGA
    AATAGATTGT TGGGAGTGGA GGAACAAATC TGGACCGTTT GAAGGATGTG
    AAGCGACTGT TTTGTTCTAA ACCCCCACGT CACA

AT1G80760.1

Model type
Protein coding
Short Description
NOD26-like intrinsic protein 6;1
Curator Summary
Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description
NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link
InterPro Scan - TAIR