Home
Mutant Lines
GT21352

GT21352

CSHL Arabidopsis genetrap mutant lines

Original: GT21352

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21352

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17884804 [Map]; Strand: w
  - AT4G38090.4 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G38090.1 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -78; Region: promoter
  - AT4G38090.2 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -78; Region: promoter
  - AT4G38090.3 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -78; Region: promoter
  - AT4G38092.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -536; Region: promoter
Flanking Genome Sequence: GT21352 - 5-prime edge
```
CTATATTATA ATCTTCTCAA TTTAATTGCT AAACTAGATT AGAAAACATT 
TGATAGTAAC ATTTGAAATT AAAATTGATT TTTAGGTTCG GTATACATTG 
GTATTGAAAT TAGAATTGAT TTGCGGTTTG GTTTATACTG GTTTAGAGAA 
GAAAACAAAC AAATTTTCAC GCGATGAGAA TTTTGGAGAC TAGTGCGTAG 
ATTGAAAAAG GCATGATTTG GAAAGGGGTA CACCCACAGA ATTGCTCTCA 
CGCGCTCAAC GCTCACTTTG TGCGAGTGGG TGTGAAATAG AGCATTCTGA 
TTGGCTTAGA AACTCTAAAA AAAGTGAAAT AGTATACATG TTGCTAGCTT 
CTGCTGTTAT TATTTACATT TTTGTTTCTT CTATCAATCT GATCAAAGTT 
CAGTTTTTTT CACATACAAT TGATTCTAAT AGAGTTTTTA GGTTATTTTG 
ATATCATTTG TATGTCAAAA ACACCAAATT TTGTGAATTT GTATGCTGGC 
AATGTTTCAT CATTATAAAC GATTCTGTTT TCATAGAGTA AAAAACAGAG 
GATCAAAAAA CAACTTTTTG GAAAATCCCC TTTTAGGTTT ATATGTATCA 
TTGCCATGTA TATTCAGGTT GTTGCTT
```

AT4G38090.1

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.2

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 3816 Blast hits to 3816 proteins in 1926 species: Archae - 79; Bacteria - 3485; Metazoa - 43; Fungi - 32; Plants - 52; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.3

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.4

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568).
Link: InterPro Scan - TAIR

AT4G38092.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR