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GT21424

CSHL Arabidopsis genetrap mutant lines

Original: GT21424

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21424

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21703369 [Map]; Strand: w
      • AT3G58660.1 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: 255; Region: intergenic
      • AT3G58670.1 - [+] show detail - Protein of unknown function (DUF1637)
        Distance: 21; Region: intergenic
    Flanking Genome Sequence: GT21424 - 5-prime edge
    CCAGCACAGC ACTTCAGGCT TCGTCTTTCA GTCATAAGAA GAATTAAAAG 
    TTGATATGAT CTAGAGAAGA CATGAAATAA GGAAATGCAA AAGATCAATG
    GAAACAAAAT TTATGATAAC TAAATATAAC ACTGTTTATG AGCAATTTTT
    TGTGTAGCTG CATATAAAAA TAGGGGAAAA AAATTATAAT ATTAAACTAG
    TGAAGTAATC ATTATCATAC AACGACATAG GCTGGAACTT AATGTGGTCA
    CAATTATGTA AGAACCTCGA CCATTATGCA GCCAGCCTCT GAATGGTTTA
    CCAATTATTC TCCTGATCAT AAGCACCTTT CTCTTTCTGC TCTTTTTTAA
    TATGTTTAAT CCTTTTTGTA TTTCTCATTT TCTTCTCACT CGACCAAA

AT3G58660.1

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G58670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1637)
Computational Description
Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1); Has 361 Blast hits to 361 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR