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GT21473

CSHL Arabidopsis genetrap mutant lines

Original: GT21473

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21473

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8976579 [Map]; Strand: c
      • AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21473 - 5-prime edge 
    TCATCATTAT GAACAGATCT TAGACTCGTT TTTGCTATGA GTTACAGTTA 
    CGAAAACATA AATCTTGAGA GAGACAGAGA AGAGTTTTGG ATCTAAAATG 
    AGAGAGAAAG GATAAAACTT TGACGTTTTT AAGTTGGAAG TTTTAAAGGG 
    CAGAGAAAGA GGATTGGTGT CTAATCGAGG TCGGGCCGTC GCGTACCTAA 
    AACCGAATCT TCTTGATGTT TAGATTTATT CGGATTTTAC TTGGGAAAGG 
    GTAGAATGGT AAATATAGGA ATAGGCTGAG GTTTGTTTGA TACAGGGAGA 
    ATATTCGGGG ATATGTGGAT TCCTTCCTTT CCATATTCTA TCGAGCTGGC 
    GATGATGTCA GCATTCTCAT GACGTTGACG TTGAGATAAG AACGACGAGT 
    CATTTTAGTC ATTACTAACT CTTTCTTTTT TCTTCGGTTA TTCTCTACCT 
    ATTTTAGAAA TATACACATG AATTTTTTTG TAATAACAAA CGAGTGAAGA 
    AGAATATCCA TAGAGATTGG AATCAAGATA TGTAACCAGA AAATTTTGAA 
    CATTCTTTAA ATTGACAGTT TAAAATATAT TATATGGTAT CATATCATAA 
    AATTACATTT TTTATC

AT1G25550.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1641 Blast hits to 1637 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1615; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR