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GT21477

CSHL Arabidopsis genetrap mutant lines

Original: GT21477

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21477

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23348050 [Map]; Strand: c
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 486; Region: intergenic
      • AT3G63210.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 5565; Region: intergenic
    Flanking Genome Sequence: GT21477 - 5-prime edge 
    GAAGGGTAAA TAGTAAAAGT TAGTTACAAC GACAGTCCAA TTAGGTATTG 
    AAACAGTAAA ATATGGAAAA AAGAATAGAA AAGGCGATGG ATGTGTTTAT 
    TAGACTTGTG TCCCACTCTC CTTATATATA TGAATCTCAC ATTTTCGAGC 
    TGTATTTTTG ATATATATTG AATATGTACA TTTGTGTGTC AATGTAATTG 
    CTTGAAAATG ACAAGTTCTA GATTTGGAAC ACTCTGTGCT GGCTATCTAA 
    GGAAAGAATA TCTGTTTATT TTTAATGCTT TACTTCTTCC TTCCCATCAA 
    TGATTCCTTC AATATAACAA AGTTCTAAAG CAATGCCTAT CTCTTTAATT 
    GGAGATTTTC TAATTGTGTA TATATATTCA TTGCTCTGAA TTGAGTTTTT 
    GTTCTCATTT ACTTGTATTT TTTTGGGTTG GAAGAACATA TAAAAGTCAT 
    TTGGGGAAAA CAATTTTG

AT3G63200.1

Model type
Protein coding
Short Description
PATATIN-like protein 9
Computational Description
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Curator Summary
encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G22550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR