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GT21525

CSHL Arabidopsis genetrap mutant lines

Original: GT21525

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21525

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58463 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21525 - 5-prime edge
    CACCTCCGCC GGCAAAGCGG CTCAACCCTG GTCCCGTGGG GATAACAGAG 
    CAGCTGGTTA AGGCAGCAGA GGTCATAGAG AGCGACACGT GTCTAGCTCA
    GGGGATATTG GCGCGGCTCA ATCAACAGCT CTCTTCTCCC GTCGGGAAGC
    CATTAGAAAG AGCAGCTTTT TACTTCAAAG AAGCTCTCAA TAATCTCCTT
    CACAACGTCT CCCAAACCCT AAACCCTTAT TCCCTCATCT TCAAGATCGC
    TGCTTACAAA TCCTTCTCAG AGATCTCTCC CGTTCTTCAG TTCGCCAACT
    TTACCTCCAA CCAAGCCCTC TTAGAGTCCT TCCATGGCTT CCACCGTCTC
    CACATCATCG ACTTCGATAT CGGCTACGGT GGCCAATGGG CTTCCCTCAT
    GCAAGAGCTT GTTCTCCGCG ACAACGCCGC TCCTCTCTCC CTCAAGATCA
    CCGTTTTCGC TTCTCCGGCG AACCACGACC AGCTCGAACT TGGCTTCACT
    CAAGACAACC TCAAGCACTT CGCCTCTGAG ATCAACATCT CCCTTGACAT
    CCAAGTTTTG AGCTTAGACC TCCTCGGCTC CATCTCGTGG CCTAACTCGT
    CGGAGAAAGA AGCTGTCGCC GTTAACATCT CCGCCGCGTC CTTCTCGCAC
    CTCCCTTTGG TCCTCCGTTT CGTGAAGCAT CTATCTCCGA CGATCATCGT
    CTGCTCCGAC AGAGGATGCG AGAGGACGGA TCTGCCCTTC TCTCAACAGC
    TCGCCCACTC GCTGCACTCA CAC

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR