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GT21551

CSHL Arabidopsis genetrap mutant lines

Original: GT21551

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21551

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16295191 [Map]; Strand: w
      • AT4G34000.2 - [+] show detail - abscisic acid responsive elements-binding factor 3
        Distance: -239; Region: promoter
      • AT4G34000.3 - [+] show detail - abscisic acid responsive elements-binding factor 3
        Distance: -240; Region: promoter
      • AT4G34000.1 - [+] show detail - abscisic acid responsive elements-binding factor 3
        Distance: -367; Region: promoter
    Flanking Genome Sequence: GT21551 - 5-prime edge 
    AATTCAAACG GCCAAAAATG CTTCCACTTA GCGAAATTTT ATTGGTGGGA 
    AACGCAAATG TATCTATAAT GATTTAGAGA CAAAGCGGCG TTTCTCATTG 
    GATCACGTTG CCCCTTCTCT ACTGCTCACG CCCGATCTGA CGTCCTATTG 
    CTTTATTAGT ATAATAACCT TATCGAGAAT AGAATAAAAG TCCCATCCAA 
    ACAAAAGAAA CCAACCCTTT TATATCACGA CAACTGTCTT TCCTTGAACC 
    CTTGTTCTTC TCTCTCAACC ACCCCATTTT TACGAATTTC CCCCTTTTGG 
    GTTTTTTTTT TGAACCCTCC TTTGGATGGC CGAATCCCCG TTCTTTTTTT 
    CCCCAAAAAA AGGTCTTTTT TTTTATAAAA AAAATTAAGG GGTTTGGT

AT4G34000.1

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 3
Curator Summary
Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.
Computational Description
abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: ABRE binding factor 4 (TAIR:AT3G19290.1); Has 2159 Blast hits to 2007 proteins in 161 species: Archae - 0; Bacteria - 4; Metazoa - 512; Fungi - 34; Plants - 1491; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34000.2

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 3
Curator Summary
Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.
Computational Description
abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: ABRE binding factor 4 (TAIR:AT3G19290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34000.3

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 3
Curator Summary
Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.
Computational Description
abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 1814 Blast hits to 1660 proteins in 150 species: Archae - 0; Bacteria - 4; Metazoa - 247; Fungi - 25; Plants - 1446; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR