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GT21585

CSHL Arabidopsis genetrap mutant lines

Original: GT21585

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21585

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1975669 [Map]; Strand: c
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21585 - 5-prime edge
    TTCAGCTGGC CTTCGTCGTC TCTGCCTGGG CTCTGAAACT GCATTTGGCT 
    GATCTTGGAT CTTCATGAAT TATGTACTTG AAAGATCATC GAAATTCAAT
    ATAAAACGGG TAAAGCTTCT CAATTTTACA ATAAACACAA CTTTTCAGCT
    ATTGAAACAG TGACTAAGCT GTTTTTCTTT TGAGCTATAT TTCTTTGTTA
    GTGCTAAGTA ATAGTAAACA ACAATTTACT ATGATCTTGC TTCTGGGTCT
    CCTTATATCC ATTAAAGACT GATCCTTTCT GCACCAATTC AGTTTAATCT
    TTCTTCTTTT AGCTTAAATG TCTCTGGTTA GTTATGTCTG AAGTATACAA
    CACCGGTTCC AAAGTTCGTT GACCATTGTT TGAGTTCTTC TTTTATTAGG
    ATTGTGAGAA TAAGAATCGG ATTATGCTAA CTCTAATTCG TAATCTGCGT
    TTTACTTTAG GTTACTCAAT GAAGCAATTC ATC

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR