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GT21590

CSHL Arabidopsis genetrap mutant lines

Original: GT21590

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21590

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 301629 [Map]; Strand: c
      • AT1G01830.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -900; Region: promoter
      • AT1G01830.2 - [+] show detail - ARM repeat superfamily protein
        Distance: -783; Region: promoter
      • AT1G01830.3 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT21590 - 5-prime edge
    TCTTCCGTTT TTGAATTAGA TTCATAGTCA CAAGTTTATT TTTGTTTTGA 
    GTGTGTTTCT CTCAGTGACT CGCCTAAAGA TCATACTGCA TAATTCTGTA
    AAATCTTGCT TAAACTCTAC GTGTGTATAC TTACTGAATC TCTCGTAATT
    TCACAGATCA AATTTTGGCT GGATGCAACC ATTTTCACAC TCAAGTCAAC
    TACTAGATTG AAGGTATAAA CTGTACACAA AATCTTTCTT TAGATCATCC
    ACTAAAGATT ACTACTAAAT TTTGGGCTAA TTTCAATATT TATTAGATCA
    CTCAGTATCT AACTTCCTCA CATTGGTGCT TACAAGTTAC AACTTGTGTT
    TGTGGTCTAA TGAATAGAGA GACAGAGACT TCCTATTGAC TTCTCTTCAA
    AGAAAAGTCT GCAAGTTAAC TTTTATCCGC AGCCAGATTT TTCCTTTCTG
    TTACTATCAA CACATTGAAT CATTCTGATC AGAAAATTAC AGCTTGTGTT
    TCCCCTTTTT AAGAAAACTT TCACCAATCA CGAAACTAAC CTTTACGAGT
    TTTGAAAAGT TTTTTGCATT GACAATGATT GTTCATGGAG GGTGAGTATA
    ATACGTGGCT GTTAATGAGT TTGATGTGTT ATTCATATGA TATATTAGGG
    AGAAGCATTT AATGGATATG CATCTAGAAA CCACTCGAAA TGATATGTCG
    TGTGGAAACT TCCTTCTTTT CTTAAGCAAT GGCTTGTGTG TATTATTAAT
    TAAATGTTGT TTTCATCTAT ACTTATTTTT TT

AT1G01830.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01830.2

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01830.3

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR