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GT21591

CSHL Arabidopsis genetrap mutant lines

Original: GT21591

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21591

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23434288 [Map]; Strand: c
      • AT3G63460.3 - [+] show detail - transducin family protein / WD-40 repeat family protein
        Distance: 0; Region: exon13 (CDS)
      • AT3G63460.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
        Distance: 0; Region: exon13 (CDS)
      • AT3G63460.2 - [+] show detail - transducin family protein / WD-40 repeat family protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: GT21591 - 5-prime edge
    ATCATGTTCG AAGAGGAAGG AACTTCAAGG ACAAAGTTGA TCAGCCATCT 
    TGGCTTTACT TTGCCTGTTG CGGAAAAGGA TCAGGCAGTA GATGGGCTCT
    CATCAGATCT CAATGGCATT AGATTAGAGG ATACTGCGGC AGATGCACTG
    GATCTTGACG ACAGTAACGA GGCAGCTGCA TTTGCGATGG ATAATGGAGA
    AGACTTCTTT AACAACTTTC CTGCTAAACC GGATACACCT GTATCTACAT
    CTGCCAAAGA TTTTATGCCT TCTGACACAG ATTTTTCTAC CAAAGGAGAA
    GAAACGCAAG AAATGCAAGA AGAAGAGGAA GAAAGTTCTG ACCCAGTTTT
    TGATAATGCC ATCCAGCGAG CGTTGATTGT TGGAGATTAC AAGGAGGCGG
    TGGATCAGTG TATAACTGCA AATAAGATGG CCGATGCTTT AGTTATTGCT
    CATGTTGGTG GTACAGCGTT GTGGGAGAGT ACTCGTGAGA AATATTTGAA
    GACGAGCAGT GCGCCATACA TGAAGGTATA TGTATATTCT TTCCCAACTT
    GATATGTAGG TAAGTGCCAT CTACACCCCT GTTTGTGGTT GCAAAATCTG
    TAAACTACTG TATGTTTATC TATTTCAGGT TGTTTCTGCG ATGGTGAGCA
    ATGATCTCAG GAGCCTTATC TATACAAGGT CACATAAGTT CTGGAAAGAA
    ACTCTTGCTC TCCTCTGTAC TG

AT3G63460.1

Model type
Protein coding
Short Description
transducin family protein / WD-40 repeat family protein
Computational Description
transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1); Has 36264 Blast hits to 25632 proteins in 1258 species: Archae - 42; Bacteria - 5004; Metazoa - 13161; Fungi - 7258; Plants - 4512; Viruses - 551; Other Eukaryotes - 5736 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63460.2

Model type
Protein coding
Short Description
transducin family protein / WD-40 repeat family protein
Computational Description
transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1); Has 36280 Blast hits to 25623 proteins in 1259 species: Archae - 42; Bacteria - 4996; Metazoa - 13160; Fungi - 7289; Plants - 4519; Viruses - 551; Other Eukaryotes - 5723 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63460.3

Model type
Protein coding
Short Description
transducin family protein / WD-40 repeat family protein
Computational Description
transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1).
Link
InterPro Scan - TAIR