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GT21611

CSHL Arabidopsis genetrap mutant lines

Original: GT21611

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21611

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3126307 [Map]; Strand: w
      • AT3G10116.1 - [+] show detail - COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21611 - 5-prime edge 
    ATGGACCAGC TAATCATACC AACTTCTACC AAGGACGGAG GGATTCCTAG 
    GTTTAGAGAA GAACATGACG ACCTTGCTAA AAGCTCTTTT ACGTTCCAAA 
    TTGATGTTGT GCCGAACTAA TCTAAAATAT CATCTTCCGG CAATTGATCA 
    TGTAGCTCTG ACCACACCAA GAGGGACATA CATATGTGAT AAATTGATGA 
    AAGTTACTCA AACTCCGGGT TATCTGAGTA AGTTCATCCT TGATTGCTTG 
    CCACATCATA TAACCTAGCT CTTATGTATA TTTACAATTT TACAATCACT 
    ACCTTGATTT TGTAGACTCG TGGAGCACGA CTTGCGGTCA GTGGCGGCGC 
    TAGGTAGATG GGAGTGGGGT CACTTGCCCC AGTAAGTTTT GTATTTTATC 
    TGATTTGCTA TTAACATTAA GTTACAAAAA TACTTAAAAG TTTAGAGGTT 
    GACCCAGTTA ACATATTTTC AAATCTCTCT TTTTCTCTTC ATCTCACACG 
    ATCACCTCAT TAGAATGTGG GATGCAATTT TTATTTGCGG AGTTTTCAT

AT3G10116.1

Model type
Protein coding
Short Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Computational Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); Has 64 Blast hits to 64 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR