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GT21649

CSHL Arabidopsis genetrap mutant lines

Original: GT21649

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21649

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7227622 [Map]; Strand: w
      • AT2G16670.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT21649 - 5-prime edge 
    TATCAAAATT GGGGTCCATA TCTCTCACAT TACTCAATAT ATCAAATTTT 
    CCCGTCAAAT GAAGAGAGGC TCCAGTGTCC ATTATCCAAG AGGGTGAAGT 
    AAACTTACCG GTTAGCTTTT CAGTTGCAGC ATCTTTCCCG GAGTTGAGAA 
    TGCTTTTGAT GGTTCTCCAC TGACTGTCGG TGAGACCATT CACACCATCA 
    CGGTCTTCGT CAGTGAGAGC ATAGTTAGCT TGCTCATATG TGTCGTGGTT 
    TGGAACCGTC ACACGATTGG CATAGGCAGC TGCACCACGT CCACGCCCTC 
    CGCTCGAATT GGTTCCTCCA CGACCTCGAG TTTGCAATGA TCTGCTCCGT 
    GGCCTATCTC CCCACCACTC CGGATAGCCA ATGACGGCAT AACAGCTTTC 
    GGATGCATGA CCACTGCGAT TACAATGTTT ACACACCATA CTCTTATCTT 
    TTTCATCACC TCTTCCTTGA TAAAGCTTCG GTCTCATTTG AGCTGCAAAT 
    GCATTGACTT CATGTTGATC ATCCAAAACA TTTGCCCCAT TCCTGAGCAA 
    ATCCTCCTCT TGTCGCACTA TGTTGTATAC CTCTTCTAAA GGTTGCACAG 
    GAATACGTGA CACAAGACTC GATCTGACCG TTCGAAACAA AGCATCATCA 
    AGACCAGACA AAAACAAAGC ATCTTTCTCT TGAAGAGCAC CAAGATCGCA 
    CACACAACCA CCACACTTGC AGATGCGCAC CGGTTTGAAA GCTAGCCATA 
    CTATCCCAAA TCTTCGTTAG CTTCCCATAA TATGTCTC

AT2G16670.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.2e-190 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR