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GT21650

CSHL Arabidopsis genetrap mutant lines

Original: GT21650

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21650

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148629 [Map]; Strand: c
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -185; Region: promoter
    Flanking Genome Sequence: GT21650 - 5-prime edge 
    GACCGGCAGG ATAGGAACTA AAAGAAAGAG AAGGGCAGAA TAGGAATTGA 
    GAAGAGGGAG GTGGCAGTGG CAGACATAAG TGGCTAGAAG TCAAAGCCAT 
    GACATCTTTT TTCTCTTCTT CTTAAATGAT TCCTAACCTT TTTCTTAATT 
    ATTTCTAATT AATTACTTTA TGCAGCAGAC AAAAGGTGTT AATCAAAGAA 
    TCATTTTCTT TTTAATATCT TACACACGAC AAGACTAGTC GCATGTGGAT 
    CAATTTACTA TTTGGAATAT TCAGTTTCTC TTTAGACTAT GGAATTATAC 
    TATATCCATA TCTAATAGAA TCTCTCTCTT TCTTTAACCA AACAAACAAA 
    CAAAATCATG CTTATTATGA TTCCCAGATC AGGGCATTAA CCAATATTGC 
    TAAGATAGAA TCATGGATCA AGACAAGAGT GGACATGATT TTGAAGATGC 
    AAACAATCAA AATACTGAAA TGGTGGTCCT

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR