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GT21677

CSHL Arabidopsis genetrap mutant lines

Original: GT21677

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21677

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290937 [Map]; Strand: c
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: -265; Region: promoter
      • AT3G49330.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -551; Region: promoter
    Flanking Genome Sequence: GT21677 - 5-prime edge 
    TTTGGATTTG ATCCTGAGTT TTCTATGATT ATAACTTAAG GTCCCACGAT 
    TAAAACAATA CATTTGGTAC ATGAAATCAC TTTAATATGA TATAAACAGA 
    ATTTTGATAA TTGATAACCA AACTGTGGTC AGTGTGGTGA TCAACCATAT 
    TTGGTAGGTC AACCAAAGAT CATCAACTCT ATTAGAAGAT TCCCTAAGAA 
    AATAATTCCA AAAATGTAAA ATTCAAACGG CGTCATTTTA GTCTTTCACA 
    AAGAAAACAC ATACGGCGTC GTTTTATCAA ATCCCAAAGT TGACGAAACG 
    ACGGCGTTAT AATGTCAAGC TTAAACCCGC GACGTCGAGG GTTTAGTTGT 
    AGAAGAGCTT CTTCT

AT3G49320.1

Model type
Protein coding
Short Description
Metal-dependent protein hydrolase
Computational Description
Metal-dependent protein hydrolase; CONTAINS InterPro DOMAIN/s: Metal-dependent protein hydrolase (InterPro:IPR003226); BEST Arabidopsis thaliana protein match is: Metal-dependent protein hydrolase (TAIR:AT5G41970.1); Has 666 Blast hits to 662 proteins in 329 species: Archae - 0; Bacteria - 214; Metazoa - 145; Fungi - 141; Plants - 55; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G49330.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G24370.1); Has 41 Blast hits to 41 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR