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GT21703

CSHL Arabidopsis genetrap mutant lines

Original: GT21703

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21703

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7334246 [Map]; Strand: c
      • AT1G20990.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -2300; Region: intergenic
      • AT1G21000.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: -3482; Region: intergenic
    Flanking Genome Sequence: GT21703 - 5-prime edge 
    GACATATTAT GGGGCTTTAC AAACCAAATT AAGCGTTCTT CCAAGCCCAA 
    TTGAACCTGC CTCAGGCCCT CAACCTCAAC TCTCTCTGAA AGGGCACTTT 
    TGTGAGTTAG TTTTTTTTTT CCTTTTTCCT GGGGGGGAAT TTTGCAAGTA 
    AGTTGGACCA ACAGGAACTT GAAAAAGGAA AAAAAAACGG GATAAAAAAA 
    GTTAAAATGT AACACCCCCC CCAAAAAATT AAAAAAAACC CCAAAACCCC 
    CAAAGGGGCA AAAACAAAAC CACCTAAAGA GAAAAACCGG AGGACCAAAA 
    ATCCAAAATT AGGACTTAGG ACCAAAACCA AATTAACCAA AAAAAACCGA 
    AAGAAAAAAA AACCAAAAAC ATTCCCGGAA AAACTTGAAT TAAACTTTAC 
    CCAAACAAAC CAAACCAAAC GGCCCGGAAA GGTTAACGGA AAAACCCGAA 
    TTTCAAAAAA CCCAAAAACG GGCAGGCAGG GGGAAATTGC AAACGGAAAT 
    TTTTTTTTTT TTTTTTTTTT CAAATTCCCA AAACCCCCCC CCCCCCAAAT 
    TCCCCCCCCA AAAAATTTAA CCCCCTAATT CCCCAAAATT TGGACCCCTA 
    CTTTTTTAAA ACCCCCCCCC CAACCAAAAA GAAAAAACCC CCTTTTATTT 
    TTTTTTAACC CCAAAAACCC CCCCCCAAAA AAAACAAA

AT1G20990.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G16050.1); Has 1603 Blast hits to 716 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 0; Plants - 1573; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21000.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G76590.1); Has 403 Blast hits to 403 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 403; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR