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GT21706

CSHL Arabidopsis genetrap mutant lines

Original: GT21706

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21706

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11852535 [Map]; Strand: c
      • AT2G27810.1 - [+] show detail - nucleobase-ascorbate transporter 12
        Distance: 0; Region: exon1 (CDS)
      • AT2G27810.2 - [+] show detail - nucleobase-ascorbate transporter 12
        Distance: 0; Region: exon1 (CDS)
      • AT2G27810.3 - [+] show detail - nucleobase-ascorbate transporter 12
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21706 - 5-prime edge
    GTCTCACCGT TAGTTACTGG CGGCGGAGAC AGAAGGAGGA GGACGGAGTC 
    TGGTTTGACC AGCTTCAAGA TCCGGTTGGG TTTCTTGTTG TTTAGCTCTA
    ACCGGTAATG AGAGCTGACC GGAAGAAGAA TCAGTGGCGG TAGTTTCACC
    GGAGAATTTG GGACGAAATC CGGTTTTTTT AGCCCAGGAA GACGGTGGCA
    TTGCGGCGGA TTCTGGAGTT GGTGGCCATG GACCCGGTTT AGGTCCGGGT
    TTCGGGTCGG AGCTTGACAT TTTTTTTCCT TGTGGAATTT CTTCTCACTC
    TTGCATAGTG AAGATTGAAA CTTTTTTCTT TAGATCTAGG AAAACTCTCA
    ATCGTCGGAG AAGGAAAACG ACAAAAGAAA ATTGGGAATT AGGGTTTTCT
    TCAAATCTCC AGAGAGAGTA CAGTTGTGTG TGAGAGAGAG TGAGAAGTTC
    TATGAAGAAG TAACAGTGAA TGTGAAAATG AGAGAGAGAG AGAGGAAAAA
    AAATCTAATC TTTTTTTTTT TAGCAAAAAT CCTGTTTTAA CAAAAAATTT
    AAAAATTAAA ACTTTTTTTT TGTTTTTTTT TTTTTTTTTT GGGGGGAAAA
    T

AT2G27810.1

Model type
Protein coding
Short Description
nucleobase-ascorbate transporter 12
Computational Description
nucleobase-ascorbate transporter 12 (NAT12); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT4G38050.1); Has 9528 Blast hits to 9485 proteins in 1925 species: Archae - 69; Bacteria - 7579; Metazoa - 494; Fungi - 167; Plants - 469; Viruses - 16; Other Eukaryotes - 734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G27810.2

Model type
Protein coding
Short Description
nucleobase-ascorbate transporter 12
Computational Description
nucleobase-ascorbate transporter 12; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT4G38050.1); Has 9357 Blast hits to 9320 proteins in 1916 species: Archae - 69; Bacteria - 7552; Metazoa - 479; Fungi - 160; Plants - 390; Viruses - 14; Other Eukaryotes - 693 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G27810.3

Model type
Protein coding
Short Description
nucleobase-ascorbate transporter 12
Computational Description
nucleobase-ascorbate transporter 12; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT4G38050.1); Has 8924 Blast hits to 8893 proteins in 1864 species: Archae - 69; Bacteria - 7265; Metazoa - 476; Fungi - 122; Plants - 377; Viruses - 11; Other Eukaryotes - 604 (source: NCBI BLink).
Link
InterPro Scan - TAIR