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GT21739

CSHL Arabidopsis genetrap mutant lines

Original: GT21739

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21739

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4173179 [Map]; Strand: c
      • AT5G13150.1 - [+] show detail - exocyst subunit exo70 family protein C1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21739 - 5-prime edge
    GTTTTGAAGG AGAGGTTTAA GATTTTCTGT GCTATGGTCG ATGAGATTCA 
    CAAGACGCAC AGCACTTGGA TTGTGAGTGA TGAGCAGATG CCCTCGGAGC
    TAACGGTGGC GATTTCGGCG TTGGGGATTC CGGGCTTATC CGTCGTTATC
    TTTGGGAGGA TGAGCGACGT CTTGATTCAC GGAAACACAC GGATAACTAT
    GTTAAGTATC AACCTGACGA CATTGAATCT TTCTTTGATG ACTTGTTTGA
    TGGCACCCCA ACTTCTATGG CGCCCCTTAG ATAACTCCTT GTCTCTTAAG
    CTATGAGGAT AAAAAAAAAC CCTACTTGTT CCTTTTGCTT CTTTTTTTTT
    ACCACAAAAC TTCTACCTGT ATCATTAATT ACCTTCTTGT TTAGAGAACC
    CTTGATAAGC TACCGTGAAA ACTTTTTGAT TTCTTTTCTT T

AT5G13150.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein C1
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR