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Mutant Lines
GT21765

GT21765

CSHL Arabidopsis genetrap mutant lines

Original: GT21765

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21765

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 20344513 [Map]; Strand: w
- AT3G54910.1 - [+] show detail - RNI-like superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G54910.2 - [+] show detail - RNI-like superfamily protein
  Distance: 0; Region: intron2 (5UTR)
- AT3G54910.3 - [+] show detail - RNI-like superfamily protein
  Distance: 0; Region: intron2 (5UTR)
- AT3G54920.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: -569; Region: promoter

TGAAAACTCG GACACAAAGA GGAACAGTAC TAAACCTTAG AAACAAGCTA 
GATTGTTAGG TGAAGCTTAG AATTTTTTTG TGTTGGAGGC TCGGGAACCA 
GAATCTGAAG CTAAGGCAGA AAATGCCCAA AGAACTGTAT AAGTATCAAC 
TTTTCAAATC TGAGTAGAAT GGTAGTCTGA ACTAGGAATC AAGAAAGGGT 
AAATGTAAAC GAAGCTTGAA TGGTAAATTG CAAGGAAAAA AGGAATATGA 
ACAAGTTGGT TTATCAGAGA TACCACAATC GCTGAGCATC GGAACGACAA 
AGTGTTGTCC TCGCCGTTGA CACTCACATA TCATCAAAGC GTTCGGCGTC 
CATTTAATTT TGGGTGTTTA ATTACCATAA AACGATGGGC CTAGATATAG 
GCCTAGTTAT GGGCCTAACT TTAATATTAT ACACACATCA AAGCGTTCGG 
CGTCCATTTG ACTTGGGTGT TTAATTATCA ACTTGCTTTA GCAACGACTT 
TGACGAGAAA TGAGATGTAT TAGGCCCAAT ATAAAATACG AGCTTGCTTA 
CCAAAATTTG AGACCCAAAT AGTAAACCAA TCTCCTCCAG AATGCAAGTG 
GACACAAATC CCCAAGAGAA ACAGAATCAA AATCTCAAGA AAACCTATTA 
GCCCTGTTTC CAGCAAGAGG GCAGAGAAGC AGAGAGAGAG AGAGAGTGTG

AT3G54910.1

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G10400.2); Has 997 Blast hits to 979 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 993; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G54910.2

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G10400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G54910.3

Model type: Protein coding
Short Description: RNI-like superfamily protein
Computational Description: RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G10400.2); Has 997 Blast hits to 979 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 993; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G54920.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Curator Summary: Powdery mildew resistant mutant encodes a pectate lyase-like protein
Computational Description: powdery mildew resistant 6 (PMR6); CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 2753 Blast hits to 2553 proteins in 415 species: Archae - 3; Bacteria - 1039; Metazoa - 313; Fungi - 409; Plants - 814; Viruses - 7; Other Eukaryotes - 168 (source: NCBI BLink).
Link: InterPro Scan - TAIR