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GT21771

CSHL Arabidopsis genetrap mutant lines

Original: GT21771

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21771

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 426284 [Map]; Strand: c
      • AT1G02205.2 - [+] show detail - Fatty acid hydroxylase superfamily
        Distance: 3846; Region: intergenic
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 1264; Region: intergenic
    Flanking Genome Sequence: GT21771 - 5-prime edge 
    AATTTGTTTT TATTTTTTAG TTTTAGGAGA CTTCGTTCAT AACTATTATG 
    ATATGAACTT ATATATGTGA ATAAATTATA TATTTGAAAA AGTCGTTTTG 
    ATAACCAGAT TATTATTTTC TTTTAAAACA TAATATTATT TTATATGCGT 
    ACATGCGTTA GATCGGTGAA ACAACCCCAA TGAAAATAAT CGAATTGATG 
    AGAATACTGA GAGTGAACTA TTGGGAGAAG CTCGTCTAAG CCATTGCAAT 
    AATCTCCACC TTAATCTTCG ACCATGTTCT TCTCACTCGA

AT1G02205.2

Model type
Protein coding
Short Description
Fatty acid hydroxylase superfamily
Curator Summary
Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.
Computational Description
ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 2658 Blast hits to 2653 proteins in 533 species: Archae - 0; Bacteria - 823; Metazoa - 248; Fungi - 388; Plants - 579; Viruses - 3; Other Eukaryotes - 617 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02210.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 519 Blast hits to 519 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 519; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR