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GT21778

CSHL Arabidopsis genetrap mutant lines

Original: GT21778

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21778

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 175571 [Map]; Strand: w
      • AT2G01400.1 - [+] show detail - unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; B...
        Distance: 0; Region: exon2 (3UTR)
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21778 - 5-prime edge 
    AAAAAATCCT TCGCTCCAGC TATCTTGGCT TTTGTATTAA CCACAGCTTC 
    TTCTGTGACA CCACCATGAC TGTGCCGTCT CTCCGTCTCC TCGTCATCCC 
    GTCCGCCGCA ATCATATCAC CGTTTAACAA CACCAAACTC GCATTCCCGC 
    TATCTTCGTC AACTTTGAAT ACCTTCCCTG TGTTGCTCTG CACCACCAGG 
    AGATAGCCTT TGCTGATGTA CACGATCCCG TTCAAGCCGC AATCGCGGAA 
    ACTTGCGTCC GCGTCTGCCG CCACAGGCTG CGAATTGAAC AACGGCGATT 
    TGGAGAAGAT CGAAGCTGCG CCGTCGCGAT CGACTTTCCA GATGAAGTTT 
    TTGGCTGAGT TGGTGACGTA AGCGTTTCCT TTGAAATCAA CCGCCACGTC 
    ATTGGCGACA TCACGAGCGA TGTCTTCGTC GTCTCCGGGA AGAGACGGGA 
    GAGGAGAGAG GAATACACGA CGGCCTCCGC TGCGGAGATC GTAGGAGGCT 
    AGGGCACTGA AGGGAGGGAG AGGCGGCAAA CTCTGGATAC AGGCAAGGAG 
    ACGGCGATTA GTAGAGTCAA CGGCGAGACC GAGGATAGTG GAGTTCTCCG 
    GTAGATCGAG ATCGGAGATT AGGGTTTCGA TGACTCCAGC GTCGGAGACG 
    GAATGAATTG TGCGGCTGTG GAGAGAACCG ACTAGAAAAT GCTG

AT2G01400.1

Model type
Protein coding
Computational Description
unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR