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GT21789

CSHL Arabidopsis genetrap mutant lines

Original: GT21789

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21789

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30338620 [Map]; Strand: c
      • AT1G80720.1 - [+] show detail - Mitochondrial glycoprotein family protein
        Distance: 1055; Region: intergenic
      • AT1G80730.1 - [+] show detail - zinc-finger protein 1
        Distance: 703; Region: intergenic
    Flanking Genome Sequence: GT21789 - 5-prime edge 
    CAAGAGTTGT TCGTCAGAGG TTGTTGTTTT TATTGCCATG TGACTATTAA 
    AGTTAAATTT TGATGGTCCT TTTTTAATCT AATCTTGTCA TGTCGCTTTT 
    ATCATTTCAT AAATAAAATT TACTAATTTT GCGTTGTTTG AATTTATATT 
    TCGACAAACT TTAGCGTTGT TCATCTCACT CGA

AT1G80720.1

Model type
Protein coding
Short Description
Mitochondrial glycoprotein family protein
Computational Description
Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G15870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80730.1

Model type
Protein coding
Short Description
zinc-finger protein 1
Curator Summary
Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation.
Computational Description
zinc-finger protein 1 (ZFP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: photomorphogenesis; LOCATED IN: intracellular; EXPRESSED IN: inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1054 Blast hits to 1054 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1051; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR