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GT21806

CSHL Arabidopsis genetrap mutant lines

Original: GT21806

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21806

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8125916 [Map]; Strand: w
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: -3132; Region: intergenic
      • AT5G24040.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 96; Region: intergenic
    Flanking Genome Sequence: GT21806 - 5-prime edge 
    GTGTGTTCCG AACGTATCTC CGGTATATGA TAGACGACTG GTTCACCTAG 
    GGGATGCTTT GGTCTAGCTA GTTTCAATAA TAACAAATGG AACTATAATT 
    AGCAGCCAAA CTTTGGTCAA ATACAAAAGG AAAATCATAG TATATACAAA 
    ACAAAACAAA AATAATAAAA GGCATGGATG TTTTAGTGAA TGTCATATAA 
    TTATCCGTTG GAGATTACCC AACCAGGGGG AAATGGAAAC AGCTCTATAT 
    ACTCCAATTT ATCTCTTAAA GATCTTACGC CTTTCTCATT GAATTCATAC 
    ACGAGAATGC TTTCAAGTTC ATATGAGTTA AATACTCCCC ACAAGTCCAT 
    GAAGATTATA GAGTTAGCCC TAAACCCTGG AATTTCAGTA GCCAAGCATG 
    AGAAGGTACA ATAATGCTCC AAGAACAACA CACGACCGTC CATATCTTCC 
    ACTTGATCCC AATCGTTTCT TTCCTCGTTT AACTCTGATA TTTCGAACCA 
    TATCTTTTTC TCACGGATAT ATGGTATGTG AAAATCGTAT CGGCTCTTTG 
    TGCACATCTC TACGAGAATG AGTTTGTCCC CTGTCATTAA AAGCTGTTGG 
    AGATAACGAA TGAAATAAAA AGACTTGTAA ATTTTAGTTT TGTTCCAAGT 
    TGCATGAAAT ACAAGATATA AAAATGTTGG TCGTCTCCTT ACCCAACGTT 
    TCCTTGTCTT ATCACAAGGT CTTGACCGCT GAAATGTATT CACTTCTAGT 
    GTTGGATCTA CCACTGTTGT TTTTCCGG

AT5G24030.1

Model type
Protein coding
Short Description
SLAC1 homologue 3
Curator Summary
Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.
Computational Description
SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24040.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1).
Link
InterPro Scan - TAIR