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GT21809

CSHL Arabidopsis genetrap mutant lines

Original: GT21809

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21809

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 94636 [Map]; Strand: c
      • AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21809 - 5-prime edge 
    GATCTCTCTC CCTCTTTATA GTTTACTTTT GACTTACAGT AGAGAGAGTT 
    TAGAGTTTTG AATTTGGCTC CGATGACGAA TCGTCTTCCT CCTTCGCTGT 
    ACGTTCCGCC TCACCAGCGC CTTGGTTCCG ATTACGGCTT CAATCCTGTT 
    CATCTCTCTC GACCACGCTA TGTCTCCGCT TATGATGACC GCGTTTCCGA 
    GGATCGCCAA CCGGTTAACT TCTTCTTCAT CTTTTTTTCA TGCATCTCTG 
    AGCTTATTGA TTGATGCTCT TACAATGGCG ATTCTAGTTT TCGATTTGCT 
    CTCGAGTAGT ATTTTATAAA AATCCCTTTA TCTTTCTACT GGAACCATAT 
    CAATTTGCAG CAGGAGGGTA CCTTTCACTG TGCCGACTTG GATGATTGGA 
    ATAAGAGATT TTCAATGCTT TTGAAAGATT CTTTAAAGCA AGAAGTTATT 
    TCCAGGGAGA AAAAAGATAG ACGGGATTTT GATAAACTTG CTGCTCTGGC 
    TACAACCCTG GGATTGTATA GGTACATCAA TCATGCTGCT CCTTTCTTTC 
    TTC

AT2G01130.1

Model type
Protein coding
Short Description
DEA(D/H)-box RNA helicase family protein
Computational Description
DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink).
Link
InterPro Scan - TAIR