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GT21813

CSHL Arabidopsis genetrap mutant lines

Original: GT21813

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21813

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23358425 [Map]; Strand: w
      • AT3G63220.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G63220.2 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21813 - 5-prime edge 
    TTGGGACTGT AGACTTGCCA GATGTTCTCA GGATCGAAAG CACAGACGCA 
    GAGGAGATGC TCAGAAGATC GAAGCTCTTT ACGGACTCTG AAGAGCTCAT 
    GACTGCGGAT AGCAGCTCGC CAGGAGCGAG AGACGAGTTC TAAATTGGGA 
    TGAAGGTGTA AAGGCACATG AGCCAGGCAT CTCAGAGCCA CTGCTTCGGG 
    GATTCCATCC AGCAGCCCAG ACATTGTTTC TTGTCTGTAA CACATTTACG 
    AGATTGATCA TCAGATACAA GCAATTGCAA ATGCCCAATC TTTGAATACA 
    AATATGCCAA AATTGACCAA AAAAGCTGAG AAGCGTGTAA AGTGAAGATT 
    TTGGGTGAAG TAACTTATTT CACCGTAAGA CCTAATAAAT TCT

AT3G63220.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 6493 Blast hits to 4467 proteins in 250 species: Archae - 4; Bacteria - 460; Metazoa - 4606; Fungi - 8; Plants - 1152; Viruses - 24; Other Eukaryotes - 239 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63220.2

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR