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GT21819

CSHL Arabidopsis genetrap mutant lines

Original: GT21819

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21819

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21548935 [Map]; Strand: w
      • AT5G53140.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT21819 - 5-prime edge 
    TACAGATTCT CGGATCGTGT TCGTTATTGT TCATGATTCG CTTGTTGAAT 
    TCTATAGTCT TACTCGTTGA ATGTTCAGGA TCTAAGTTTA ATTGAAGAAT 
    TTAGAGGTTG AAATCAGTTT AACAACATTT CTCAACTTAT CCATATAGAT 
    AGATAGGGTT TGTTATCTTA ATTTGGTTTT TAGGGATCCA GGATCTGTAT 
    TTTAGCTCTT ATGTTGATGA TGATAATGTT CTGTGTTGTT GAAGTAGCTC 
    GTATCTTCGT TTTCTGATTT AGGAATCGTA TTATTACTAA TGACAGATTG 
    AATTTTTTCT ATATGCAGCT CCTGCATTGG AGAAACTAAT TTAAGGTAAG 
    ATTTGGCTAC TTAGATGGTA TGCAGCAGTT TCATAAGGAG TTTCATTGTT 
    CAAGCTGGTT GTTGTATTGG GGTGTTGGCT CAAGGAAGAC ATCAGTTTAT 
    TCATCTCACT CGA

AT5G53140.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR