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GT21824

CSHL Arabidopsis genetrap mutant lines

Original: GT21824

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21824

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15550622 [Map]; Strand: c
      • AT4G32200.1 - [+] show detail - DNA-binding HORMA family protein
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT21824 - 5-prime edge 
    CTGCAGAATA GGATTTTGCA CCTGAACCAA TGACAAGAAA AATGTTTAGT 
    TTTGTTTCAG CATATAACCA AATAGAAAAA TTATGGTTTG TCTGTTTGTT 
    CACTTACAAT TGAGGCAGGT CTTCCTTTTG TATCCTTCAC CTTTGCTAGC 
    TGATGTTCAA CCTGATCCTG TTTGACATCT TGAAGTATTT CACAGATAGG 
    TGTAATTAGA AGAAGCTTTT CTGTATTCAA TGAATCGAAT TTTGCTTTAA 
    TATTTGTCTA ATAATTTACC TTCATTAACC TCTCCATGGT CAGCGTCTTT 
    GTTCTCTGTT AAGATGAGTT TACTCGGCTT AGTGAAAACC TTACAAGGCT 
    GGTCATCATG GAGAGAATCA GGTCCTTTAC TCCTCTCATC ATCTTGCATG 
    TTATCATTTT CATCCTCACA AGGATCATAA GGATCAAGCA CGCTCTTGAC 
    CTGCATAGAT CATCCACAAT GGATGGACAT CATAAAGACG AGAGAAACAT 
    GTCTGTATAA AGAGTAGCAG CCTATTCTTC CAATCAGATT ACCTTTACAG 
    TTAACACGTG ATGTTGGCTG TTAACATTAC CAATTTCCAT TCTCAGAGGA 
    ATCTTTGGCC ATACATACTG AGCTTC

AT4G32200.1

Model type
Protein coding
Short Description
DNA-binding HORMA family protein
Curator Summary
meiotic asynaptic mutant 2, homologue of ASY1
Computational Description
ASY2; FUNCTIONS IN: DNA binding; INVOLVED IN: synaptonemal complex assembly; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT1G67370.1); Has 963 Blast hits to 893 proteins in 304 species: Archae - 15; Bacteria - 206; Metazoa - 200; Fungi - 133; Plants - 165; Viruses - 16; Other Eukaryotes - 228 (source: NCBI BLink).
Link
InterPro Scan - TAIR