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GT21886

CSHL Arabidopsis genetrap mutant lines

Original: GT21886

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21886

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9808988 [Map]; Strand: w
      • AT5G27700.1 - [+] show detail - Ribosomal protein S21e
        Distance: -482; Region: promoter
    Flanking Genome Sequence: GT21886 - 5-prime edge 
    GTGGGAGCCT CTAGCAAAAC CATCTACAAG ACGAGATACA CCACAGATTG 
    GCAAGCGATT ATTCACAGTG TCTCTAACCA TTGGCCGAAT CGGATTGAAG 
    GGTTCTTAGC TCGTTGTGTT TTGCAGGCAA CGATACACAC TATATGGCGT 
    GAACGAAATG AGCGCAAACA TGGCAATCAC CCGAGCCCTG CAGTTCGACT 
    AGTAAAGTGG ATTGATAAGC ACATTCGGAA TCATATATCG GCGATAAATC 
    TAAGTGGAGA TCGAAGATAT GATGGGGGTC TTCAAATTTG GTTTCAAACA 
    AGAGAGACGA GTTAAGCAGA GATTTCTTCA TGAGTTTTTA TTAATTGCAT 
    CTCATAAGCT TTCTTTTTCC AAAAACGTTA CACAAGTTGT AAACACATAT 
    ATTCTTTTTT TTTGAATCTA ATTTAACATT ATTTAAAAAA AAAAAAAGCT 
    GTAAAAGCAA TTGACAATCA ATATCATCAT TTGATTTTCA ACGGTTCAAA 
    TTAAAATTAC AAAGTTTCCT TCTTCTTTTC TTTCCTTTTG TTCAAAATTT 
    AAGCCCACCC AAATTATTAA CCCCGTTTAT GGTTTAAAAA GGCCCTTATG 
    GAAAATAATA TCATATTTAC AAAAACCAGG TACATAGGTG ATTTATT

AT5G27700.1

Model type
Protein coding
Short Description
Ribosomal protein S21e
Computational Description
Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link
InterPro Scan - TAIR