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GT21892

CSHL Arabidopsis genetrap mutant lines

Original: GT21892

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21892

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30135724 [Map]; Strand: c
      • AT1G80110.1 - [+] show detail - phloem protein 2-B11
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT21892 - 5-prime edge 
    TATAAAAACA AAACTAGAAA ACGGAACCGA TAAACAGATG TGATGATGAA 
    TGTAATAGAG GATTAGAAGA AGAAGGTGGG TTAATTACCA TTAGAGTGCC 
    GTTGATAATA AGAGGGTTAT CGACCAGGGA GAAGAAGAGT TGCTTCCTGG 
    TGGGAAGACC CGCAGGCGCC GCACAGCCGG CGGGGAAATC AACCGGTGAG 
    ATATGATTCC AGACATCGTC CGATCCGGCG GCGGATCTGA ACATACTGTG 
    GACCGCCCAT ACACGGCAAA CGTCTAGAGG AGTTGTCTAG GACAGGATCT 
    TGGCGATGCG ATCTTCTGGG ATATTATTCA TTGCTTCCTC CGATTGATTG 
    CTTATTTGCT TGATTGATTA TTTTGGGGTT CACAAGATCA TTTCATCTCA 
    CTCGACCATA TGGAGTGGCG TACATACATG ATACATGCAC AAGGATTCGT 
    CCATATATAA CACGAGATAG TCAAATAACA TCCCATTTCA ACGAATGCAT 
    CTAAATTGTT ATTCGATTTT TTGTTTCTTC TCTCTCGA

AT1G80110.1

Model type
Protein coding
Short Description
phloem protein 2-B11
Computational Description
phloem protein 2-B11 (PP2-B11); FUNCTIONS IN: carbohydrate binding; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B12 (TAIR:AT5G24560.1); Has 567 Blast hits to 552 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR