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GT21960

CSHL Arabidopsis genetrap mutant lines

Original: GT21960

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21960

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 426797 [Map]; Strand: c
      • AT4G00990.1 - [+] show detail - Transcription factor jumonji (jmjC) domain-containing protein
        Distance: -147; Region: promoter
    Flanking Genome Sequence: GT21960 - 5-prime edge 
    GTATATGGGC TTTAAAGTCT ACTTCGTGAA CGGTACGTAG TAATTAATTA 
    GGGAAAAAGA CGTTTCATTA CTTTTTACTA TTCTATCGTT TCAACTTCTG 
    TTTTCTTTCC AAATTTAACC AATTTTTTAA ATCACCAAGT GGTTCGATGG 
    TTGTACATAA TTTTTAATGG GTTTTGGTCT TGGGTTAGAG ATTTCAAATT 
    CATGGCCAAC CCAATTTTCA TTTTAAGTGC TTCATCTCTC TCGA

AT4G00990.1

Model type
Protein coding
Short Description
Transcription factor jumonji (jmjC) domain-containing protein
Computational Description
Transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, RING-type (InterPro:IPR001841), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G11950.1); Has 966 Blast hits to 671 proteins in 113 species: Archae - 0; Bacteria - 8; Metazoa - 538; Fungi - 54; Plants - 301; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR