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GT21993

CSHL Arabidopsis genetrap mutant lines

Original: GT21993

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21993

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19266590 [Map]; Strand: c
      • AT3G51910.1 - [+] show detail - heat shock transcription factor A7A
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT21993 - 5-prime edge 
    GTAGAAGAGA CTAAAAACAA AACCAAAAAG AAATCCATCT AGTTAGGAGG 
    TGGAAGCCAA ACTCTCATCA CTAAGCAACT CTTCCCAGAA ACCATCATCC 
    AACTCTCTCT CTACCACCAG TTGATGATCC TCTTCTTCCA ACATATTCCT 
    CTGTTTTCCA TGCCCTTGCA TCTCCAAAGC CAAAACTTCC AATTCCGACA 
    TCGAAGAAGA ACCTCTTTTC CTCTTTGCTG ACTCATTATC CTCAAGCTCC 
    TTAATTTTTT TATCTCTTTG TTTCAACAAC TGATGCAAAA ACGAAGGACT 
    CTGCATTGCT CTAGCCAGAA ACGACATCAT TTGTCTCTGT TTCCTCTCTG 
    TTCCTTCTAT CCTCTGTTCC ATAGCTTTGA TGTAGCTTTT CGTTGTTTGT 
    TGCTGCTGTC TTAGACTCAC TATCTCCATC ATTAGCACTT GCTTCTCTCT 
    GCGAAGCTCG TTGCAAGCGT CATGGCTTGG TGAAGATGAT GGAGTAAAAG 
    GGTTTCTCCT CTTGATGTTC TTCAACAACT GTCTTTGTCC TAACAAAAAC 
    TCTTCGTTTG CAAATTCCCA TCTCTCTGCT TCTATCTTTC TGAAACCCTG 
    TAATTTTTTT AACATAAGTA TTCAAAAACT AATCTTTTGA AAGTCTACAT 
    ATTCTCACAA ACATCAATAA TTGGAGTGAG AACTCTTTCT ATGTTTTTAT 
    ATGTTAAAGA ATGGAACAAG TGGGCAACGT TAAAGCTGAT TAGTGAATAA 
    ACAATGGAAA TTGGGATAAG ATCGCTGACT GTTTCTTTTG ATTATTTT

AT3G51910.1

Model type
Protein coding
Short Description
heat shock transcription factor A7A
Curator Summary
member of Heat Stress Transcription Factor (Hsf) family
Computational Description
heat shock transcription factor A7A (HSFA7A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of cellular protein metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G63350.1); Has 2181 Blast hits to 2167 proteins in 235 species: Archae - 0; Bacteria - 14; Metazoa - 383; Fungi - 487; Plants - 788; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Link
InterPro Scan - TAIR