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GT21998

CSHL Arabidopsis genetrap mutant lines

Original: GT21998

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21998

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5060831 [Map]; Strand: w
      • AT3G15030.1 - [+] show detail - TCP family transcription factor 4
        Distance: -850; Region: promoter
      • AT3G15030.2 - [+] show detail - TCP family transcription factor 4
        Distance: -850; Region: promoter
      • AT3G15030.3 - [+] show detail - TCP family transcription factor 4
        Distance: -850; Region: promoter
    Flanking Genome Sequence: GT21998 - 5-prime edge
    CAATTAGTTC CACAAGTCAA AATAGCTAGA AAAGAAGTAT TGGATTTTAG 
    AACAAAGAAT AACGAGAGTC TTATTGTGTT TGGTACTAGT TTATAGAATC
    TAAAACAGGA TTGCAAAAAA CAAAAACATC AAAAACGAAG ATGAGAGATG
    AAAAAAGAAA ATCTTAGATT ATAAAGAGCC CTAATTGTAT TGCTAACTAA
    TATTATATTC TTCTTCTCAC TCGACCAATT TTTCGAATAA AATCTACTTT
    AGTTAACTAT TGAGATTCTT ACAACAAAAA GGTAAAAAGA AGTGGAGCAT
    CAACAAACTT TATGTATTTG CATTGAACTA GCATGGGTCA ACCCTTAAAA
    GAAACCGAGA AGCACAAAAG GTTGAATTGA ACCTTGACCC ATCTAACACC
    ATAGGGGGTG AGGGTATTTA TTCATTTATT GAATTCGGAA ACTCGAAAAA
    TAAAGTAGCT AGTTCATTCC AGTGATTTCA ACTTTTTAAG TATATAATCC
    CCATGATTAT GTATGTATGT GGACATGTCC ACGAAAAGAG TGCCCATTTT
    CATCTCTCTC GA

AT3G15030.1

Model type
Protein coding
Short Description
TCP family transcription factor 4
Curator Summary
Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description
TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15030.2

Model type
Protein coding
Short Description
TCP family transcription factor 4
Curator Summary
Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description
TCP family transcription factor 4 (TCP4); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1); Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 88; Fungi - 13; Plants - 1470; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15030.3

Model type
Protein coding
Short Description
TCP family transcription factor 4
Curator Summary
Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.
Computational Description
TCP family transcription factor 4 (TCP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1).
Link
InterPro Scan - TAIR