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GT22007

CSHL Arabidopsis genetrap mutant lines

Original: GT22007

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22007

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9450436 [Map]; Strand: w
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22007 - 5-prime edge 
    TGAGAGCGAT GCGTAGGGAA GTAGTAGAAC TCGTCGACAT CGAAGAATCC 
    AACCCAATTG CATTCTTCTT TCGCTCTAAC CGCACAATGC GAAAAACCGG 
    CTTCTTGAGT CTTGATCCAA GGCCAAACAT GTCGACTCAC ATTGTAATTC 
    TCCGAACTAA GCAACTCAAT CTCCTCTTGT ATACCATCAT CGCTGTTGTT 
    ATCATATATA AACCAACGTT CGACACCGAG CCACGAGTGA TACATGATCC 
    ATTCACGCAA GAACGGAGCT TGGTTCCATA ACATTGTACA AACACAAAGC 
    TCATGCTTAA CTCCACTCTT CTTCTCCTTC ATCTCACTCG AC

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR