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GT22008

CSHL Arabidopsis genetrap mutant lines

Original: GT22008

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22008

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9450435 [Map]; Strand: w
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22008 - 5-prime edge 
    TTGAGAGCGA TGCGTAGGGA AGTAGTAGAA CTCGTCGACA TCGAAGAATC 
    CAACCCAATT GCATTCTTCT TTCGCTCTAA CCGCACAATG CGAAAAACCG 
    GCTTCTTGAG TCTTGATCCA AGGCCAAACA TGTCGACTCA CATTGTAATT 
    CTCCGAACTA AGCAACTCAA TCTCCTCTTG TATACCATCA TCGCTGTTGT 
    TATCATATAT AAACCAACGT TCGACACCGA GCCACGAGTG ATACATGATC 
    CATTCACGCA AGAACGGAGC TTGGTTCCAT AACATTGTAC AAACACAAAG 
    CTCATGCTTA ACTCCACTCT TCTTCTCCTT CATCTCACTC GA

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR