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GT22015

CSHL Arabidopsis genetrap mutant lines

Original: GT22015

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22015

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17229633 [Map]; Strand: c
      • AT3G46780.1 - [+] show detail - plastid transcriptionally active 16
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22015 - 5-prime edge 
    TTGTATGTGG ACCCGCTGAT GGTGCCGTCG TAGACTATCG CCACGTGGCT 
    TACGCCGGCT AGCTCAGCTG CTTGGACCAC GAGCAATGCG TCTGAGGTCG 
    AAACTTGGGC GTCCGGACCA TTCTCTGTTG CCCCGACCGT AACAACAACT 
    TTGGTTGCGT TTCCAATCGC TTTTGCTATT GATTCAGCGT CTTGGAAGGG 
    GGATTGAACT GCGTTTAGCC TCTTGACTTC ATCATTTGAT AAAATCTGTT 
    GAAAAGCTGA TCGTCAAACC ATAAATCAAA GCTCTAAACG CCACCAAATT 
    CGTAATCACA CGTTAATGTG AATTATTACG AGTGACACAC TGACATACAG 
    TACTTACATA ACATTACATG CGAAGTTAAA GCAATTATTA ATACCAAACC 
    GAGTTTGCGT ATCGCTAAAT CTTAAATCCA AAGTGCGATT GCGACCAAAT 
    ATCAAGATCA ACATTATCGC GTTTAGAAAA TTGACAGATT ATGAATTAAA 
    GGACTTAAAA ACAAAACCGG ACCTTGTAAG TAGCCGCGAC ACGAGCTAGG 
    TCCTGGGCAG CTCCAAGGTC AGGAACACCG GCTCGAACAC TGAATCCTCG 
    TTGTAAGAGC GTTTGAGCTA TGCGTATACC AGCTTGTCCC GTAGCACCAG 
    CCACAAAAAT AGTACCAGGA TCTTTCTTTC TGTTATTACC AAACACTAAA 
    CCGGTAGAAG GATTCGTCAC AACCGGTATC AGTGACTTCA

AT3G46780.1

Model type
Protein coding
Short Description
plastid transcriptionally active 16
Computational Description
plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink).
Link
InterPro Scan - TAIR