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GT22026

CSHL Arabidopsis genetrap mutant lines

Original: GT22026

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22026

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 295751 [Map]; Strand: w
      • AT2G01667.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 195; Region: intergenic
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: 759; Region: intergenic
    Flanking Genome Sequence: GT22026 - 5-prime edge 
    AGCTGATCAC AGACTCACGA CATGGCACAA TCCAAATTTT ATTCAAAACT 
    CATCAATTTG ATAAAATTAA AGCAAATATG TGAATGAATA TTAAAAATGA 
    CTAGTAACGA AAAAGCTTTA ACGAACAGAA ACATAAATAA TTCAATATAC 
    AAAATTTTAA AAATATTTAT TAGAAAAATG TGATAAATTA CTTCTTTACA 
    TATGTTATAT TAGTAAAAAG AACAAATTAG CTGCTATTAA AATGAAAAAA 
    AAAATATAAC TAATTTAATT CTTCAAAGGA ACTAAAAAAA CATAAAAATT 
    AATCAAAACT CTTTGTCAAC CACAAAACCA AAAAGGCTTC CAAAAAAAAA 
    GTTAAGTTTT TATTTATTTG GGCAAACCTA TGTAGTTAAG TTTAAGTCAG 
    GGATTTTTCA CATTTTCCCA AAATTAAGGG GACTAAAATC AACACTACCA 
    AAAATGGTTT TTTTTTTTTA ACAACCTTAA TTTTTTTTTT TAAACAAAAA 
    ACCTTGGTTA GAAAAAAAAA AAAATTAAAA CCCCCCAACC CCCGGGGAAA 
    AAAGTTGGTG GGGGAAAAAA AAAAGGGGGG GACCGGGGAA AAAAAAATTT 
    TCCCCAAAGG GGAACCAAAA ATTTTCCCAA AAAAAAACCC CATTTTGAAG 
    AAAAAAACCC CCCCCCCACC TTTTTTTTAT TTTTCCAAAA AAATTTTGAA 
    AAGGAATGGG TTTTTTT

AT2G01667.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR