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GT22032

CSHL Arabidopsis genetrap mutant lines

Original: GT22032

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22032

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4741286 [Map]; Strand: c
      • AT3G14230.3 - [+] show detail - related to AP2 2
        Distance: -2150; Region: intergenic
      • AT3G14240.1 - [+] show detail - Subtilase family protein
        Distance: 187; Region: intergenic
    Flanking Genome Sequence: GT22032 - 5-prime edge 
    TTTCTAGATG AGTTGGTAAA AGTAGAAAAA GATATGATGA TTTTAAATTT 
    GTTTCTATTT ATATGTGTTC ATCTCACTCG ACCATTTTTT AGTTTTAATA 
    GAGAGTTTAT ATGACTTTTA AAAATTGATT TAAAACTGTG TCAAAAATTA 
    AAAGGACAAT AAAAAATTTG CATACAACCG AAAATACTTA TATTTAGACA 
    AGAAAAAATA ATACTTGTGA TGCTGATTTT ATTTTATTAT ATATCATGAA 
    TCATGATCAT CCAATTTTCC GGATAAGCCA AAGTCAAAAT GATGGGTTCC 
    CCCTAATCTT TTATGCTGAG AAATAGATGT ATATTCTTAG ATAGTAATAT 
    AAAATTGGGT TAAAGAATGA TGATTCGATT ATAGCCTCAA CTAGAAGATA 
    CGTGTAGTGC AGGTGTGTAG TTAACTGGTG GTAGTGGCAG ACAACCAGAT 
    TAGGAGTTAA ATAAAGCCTT TAGATTTGAG AGATTGAAAT ATTCGATTGG 
    AACCTTTCTA GATTTTTACA GCCATCTAAA ATTAGATGCA GATCACCTAC 
    TACCATTCAA AAATGAGCAA AATAATTTCA TTTACATTTT CCTAGCATAA 
    GATATAATAA TAAAATAGTG CTCATTTTAA TTACTTCTTC TGAATATTTT 
    CGTTATTTTA AATTTTGCTT GTCTATACTC TACAGCTCAT TTAATAACGG 
    AAAC

AT3G14230.3

Model type
Protein coding
Short Description
related to AP2 2
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.
Computational Description
related to AP2 2 (RAP2.2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 12 (TAIR:AT1G53910.2); Has 6242 Blast hits to 5847 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6195; Viruses - 4; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14240.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 2 (TAIR:AT4G34980.1); Has 8878 Blast hits to 7637 proteins in 1214 species: Archae - 263; Bacteria - 5045; Metazoa - 160; Fungi - 690; Plants - 1978; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink).
Link
InterPro Scan - TAIR