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GT22059

CSHL Arabidopsis genetrap mutant lines

Original: GT22059

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22059

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682418 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 27; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2648; Region: intergenic
    Flanking Genome Sequence: GT22059 - 5-prime edge 
    CTCATTTGTC TAATGTCTTT TAGTATACTA CTGGGGTTTG ATTTATGTAG 
    TTAAATACTT CATTACCTTT GGAGAAAAGT TGAAAACTTT AAACTAGCAA 
    AATGAGTTTC ATCAGTATAA TCTTAGGTTC ATCAGTTTCA AATTTGTTGC 
    TACCAATTCA AAGAGCTTCT TCTTATGGTT GCATACCTTG AGAAGAGAAA 
    CTGAATGTTG TGAGTAAAGT TTCTTCTTAA GGTATTTTGT AGTTTCCAGG 
    TCTGCAAGTG AGTAAAGCTC CTGGTTAAAT CCATGTATGA GCTGCATCTC 
    CCCACTTGAG CTCTTCTAAA GCTACCCTCA GCGAATGGAG TTGAAATTGT 
    GTTTAGATGC AACAGGCTCC AATTTAGCTA TAATCTGCTC AACAGCGTCT 
    AAAACTGCAG CACCATACAT ATCAGAGCTC GCAGAAGCAG CAGTAGGTGA 
    CGCGTTAGGA ACCTATTAAG AGGCAATCAA AACGACAAGA GAGCAATAAC 
    AGTGTGTGAG GCATTTGGAA CCTATTAAGA GACCACAAAA GATAAGAGAG 
    AACAATATCA GTTTTGTCTT GGCCAAAAAG TCCACTGAGT GCATGTAACC 
    GAGTTAGATG TACCTTGTAT GTGCTTGATT CTGACACAAA AACTGACTAA 
    GGGGAATGAC ACAACCTTTT TATGCAAATC CTTGACCCAT TTCAACACCT 
    CCATGTGTCA CCAAAACAGT CCCATTGGTG CAAACATGAA CAAAAGCACC 
    GGCCTGTAAT AATAATATGT GTT

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR