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Mutant Lines
GT22061

GT22061

CSHL Arabidopsis genetrap mutant lines

Original: GT22061

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22061

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 940525 [Map]; Strand: w
- AT3G03740.1 - [+] show detail - BTB-POZ and MATH domain 4
  Distance: -717; Region: promoter
- AT3G03750.1 - [+] show detail - SET domain protein 20
  Distance: 0; Region: exon1 (CDS)
- AT3G03750.2 - [+] show detail - SET domain protein 20
  Distance: 0; Region: exon1 (CDS)

TCGCGGGGAT GGAAGAGATA GCTAACGAAT GTGGGTCGGG TTGTGGATGC 
GGGTCCGATT GTTCGAACCG GGTTACGCAG AAGGGGGTTT CGGTTAGTTT 
GAAGATTGTG AGAGATGAGA AGAAAGGTTG GTGCTTGTAC GCTGACCAGC 
TTATCAAGCA AGGCCAATTC ATCTGTGAAT ATGCAGGTTA CAATTACATT 
TCGATTTCAT ATTACATGAT TAGAGGAATA TTAGCATTAG GTAACGTTAA 
CCAACTTTTG GTTTCCTAAT AGTATAGTGA TTCGTTTTAT TGCAGTAGGT 
CACTAATTTT GGAAGATTGA TAATTGGAAC TTGAAAATCA AGCTTAAGAT 
TACATGATTT GAGGAATATT AGCATTAGTT ATTAGCCTTT TACACTTGGA 
CTGCATATGA TTTAGCTCGA TGCGTTGAGA TGAGATTCTA GCATGGTATT 
AAGAGTGATC TCCATCAGTG AAAGATCTGA GCTTTCGAAA TGTTCTTGTT 
TCAATCGTTT AGAGGTAGTA TCACAATGCT GGATTTGGAG ATTAGAGATA 
ATGACAAATC TTTCTTCTTT CTTGAATGTG TTTTTTCTTT GTGATCTGCC 
TTAATGACTT GGTTTATGCA AAAGTCATAA ACTTGATTTT GTCGTCTCTT 
CTTATAGGTG AGCTATTGAC AACAGA

AT3G03740.1

Model type: Protein coding
Short Description: BTB-POZ and MATH domain 4
Computational Description: BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03750.1

Model type: Protein coding
Short Description: SET domain protein 20
Computational Description: SET domain protein 20 (SDG20); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 3 (TAIR:AT1G73100.1); Has 3083 Blast hits to 3057 proteins in 283 species: Archae - 0; Bacteria - 58; Metazoa - 1675; Fungi - 416; Plants - 716; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G03750.2

Model type: Protein coding
Short Description: SET domain protein 20
Computational Description: SET domain protein 20 (SDG20); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding (TAIR:AT2G23740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR