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GT22064

CSHL Arabidopsis genetrap mutant lines

Original: GT22064

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22064

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172142 [Map]; Strand: c
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -114; Region: promoter
    Flanking Genome Sequence: GT22064 - 5-prime edge 
    TGCAGTGTAT TAGAAAGCTT TGTTTGAATA AGACGCCGTT TTTTATTCAA 
    GTAAAATTTC AAAAATCTAG ATTCAAAGAA AAAAATTCAA AAATCTATGC 
    AAGTCTTTAA CCACAATTAT AAAGTTAGGG TTTATAATTT GACTTAGGAC 
    CTGGGCGTTC GGGTATTCGC TTCGGTTTTA GTTGGATTCC GATTCCTTCG 
    GTTTTTGAGT GTAGAATCCA TATATGAACC GAAACAGTTT CAGTTTGGTA 
    CGGGTTTGGT TCTAGTTCTT TCGGTTATGA AGTTTGGGAT CTATTCGGAT 
    ATTTTATTTC AGATATTTCG GATATTTTCG AGTATTTTTT TGGATATTGT 
    GGTGTTATAT ATATATATTT TAAGTATATT TTGGTATTTT AGGTAACTAA 
    TATTTTTGGA TAATATAATC ATATTTCGGA TACCTAAAAT ATTTCTGGGT 
    TCGGTTCCTA TTATTTTGGT TCTAGAATTT AGGATCTATT TAAGTATTTT 
    ACCATTTCGG TTCGGATTCG CGTTCGGTTC TC

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR