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GT22066

CSHL Arabidopsis genetrap mutant lines

Original: GT22066

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22066

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17709566 [Map]; Strand: w
      • AT3G47965.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -657; Region: promoter
      • AT3G47980.1 - [+] show detail - Integral membrane HPP family protein
        Distance: -808; Region: promoter
    Flanking Genome Sequence: GT22066 - 5-prime edge 
    ACCCAAAGTC TCTGGCCTTG TCTGCTTTCT CACAATAAGT ACTAATCTTG 
    TCATAAATTT TGTTCTTCTC TCTCTACCAG AATTACTTTA TAAGATGTGA 
    TATAACTAGG AAAAATCAAT TGATAGATCT TTTTAACCGG TAACTGATAA 
    TTCGTTCCTC TTTGAGAGAA GAACACGCTA ACATAATTTG GGTTATATTA 
    TAACGTATTT AATATATATA ATTGTGAGTT TACTTTATGA TTGGGGTGCA 
    CGATTGGAAT GATGGAACAT GTGTATGCAT GTGAAGGCGA CGTCTTCCGT 
    ATATCTATCA GAGTGATTGA TACTCCTCTC TAGTACACCA ATATTATCAT 
    AATTATAAGG AGAATATAAA CGAAGAATTA GATGCTTTCA CCTTTGTAAT 
    CCTTTGATCG TTCGACTGAT CTTCCACACT CACCTTTGTG CCCCATTCAT 
    CTCCCTCGAC CAACAACAGT GCACCTTGAA TTTAACATTG CGACCCGATA 
    AGTCGTTGAA TGGGTTAGAA TCCGGCGTTA TAGGGGACTG TGGACGACCA 
    TCTTTAACAT AGATATCCAG CTCCTCCAAG CAGGAGAAAT AGTCCAAGAA 
    ATGCTTGATC ATGTTCATC

AT3G47965.1

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G47980.1

Model type
Protein coding
Short Description
Integral membrane HPP family protein
Computational Description
Integral membrane HPP family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: HPP (InterPro:IPR007065); BEST Arabidopsis thaliana protein match is: Integral membrane HPP family protein (TAIR:AT5G62720.1); Has 1433 Blast hits to 1433 proteins in 460 species: Archae - 0; Bacteria - 811; Metazoa - 0; Fungi - 64; Plants - 57; Viruses - 0; Other Eukaryotes - 501 (source: NCBI BLink).
Link
InterPro Scan - TAIR