1. Home
  2. Mutant Lines
  3. GT22076

GT22076

CSHL Arabidopsis genetrap mutant lines

Original: GT22076

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22076

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1593483 [Map]; Strand: c
      • AT3G05500.1 - [+] show detail - Rubber elongation factor protein (REF)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT22076 - 5-prime edge 
    CGTTTGAGTA GCCATGAGGA AATCGATGCA AAGAGATTAT CGAAAAAGGC 
    GATTCGTTTG AAGAGAAGAG AAGAAATTTA AAATTGATTA TATTTGACGA 
    ACAAAACAAA GCAATGGTGA TGAGAAATTG ACGTGACCTA GGTTTCTTTA 
    TATAACAAGG ATTTTTGGCA CGTGTAAGAA CCTTATTACG CGTGTAAGCA 
    AGCGTGTGTT TTCTCTAATT GGGTCGGTTA GGAGCGCGTC TTTGTATGCG 
    CTCTCTCGTA ACCATCCATA TTCTTTGGGC CGTTGACGAC TTGTGGGTTA 
    AGTAAATGTG TGTCGCTAAG AAAAGGAAAT TTTTTATTTT GATTTTGTTT 
    TTTCTCACCA GAAAAGGAAA TTGTTTATAA TAAGTATTAT AATAAATACA 
    AGAATATTCT TGTGCTGGGG ATGAAGACTT GGGAGTCAAT GGAGGAATTT 
    ATTTTAGATT CTAATTTACC TAGTTTA

AT3G05500.1

Model type
Protein coding
Short Description
Rubber elongation factor protein (REF)
Computational Description
Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR