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GT22077

CSHL Arabidopsis genetrap mutant lines

Original: GT22077

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22077

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 207473 [Map]; Strand: w
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron8 (CDS)
      • AT2G01460.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT22077 - 5-prime edge
    AGATAATAAC TTCCTTTCCT CAAGAAAGCG ACGTGCAGAA GAGATGAGTA 
    ATACGGATTC TTCTATTATG TGTGAATAGG TTAAGATTTT TAGTTGGTTT
    TCATAGGCCA ACTGACTTGG TGAGTTGGTT TTCAGTTTTA TTGAGATGTA
    CCTCAGACCA CCTTCTGCAA GCGAAGAGGC ACGGATAAAT GACTGGATTA
    AAGTTCGTCA AGCTGGTATA AGGTACTATC TGTCACTTGG AGACCAAAGG
    ATTGTTGACA AGCATTTCAT TATCCGGCCT AAAGCTGAGT TTGAGGTGAG
    TTATTACATG TAATTGCCGA AGTTTCAGTA TTTCTATGGT GTTTCCTTCT
    TCCTAGTTCT GCAATTTTTT ATGGAATGTG AAGTATCGCT ACCTCTTTAT
    TGTTAGCGCA AAAGATAATG GTAGTAATGG GGTTATGTAG GATTATACTG
    TTTTGGAGAC TGGTCCAATA CTTTCCTTGG TTGTGTTAAT TTCTCATATT
    ATCTACAGAA GAGGCATGCC TATATTTGTG GAATCTGGAT TCA

AT2G01460.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, kinase activity, nucleotide binding, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), ATPase, AAA+ type, core (InterPro:IPR003593), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 3953 Blast hits to 3156 proteins in 1342 species: Archae - 38; Bacteria - 3073; Metazoa - 244; Fungi - 122; Plants - 227; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01460.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1).
Link
InterPro Scan - TAIR