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GT22080

CSHL Arabidopsis genetrap mutant lines

Original: GT22080

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22080

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15978727 [Map]; Strand: c
      • AT2G38130.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: exon6 (CDS)
      • AT2G38130.2 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT22080 - 5-prime edge 
    CGGGTTTATA AGAGCCAAAC GGCTATACCA CTATTACTTG AATGGGATGG 
    ATGCTTTTCG CCTGAAGCTC TTGTTCCCTA AGCCTCGTGT ACCTCAAATA 
    CCTTCTCAAG TTCAAACCCA ACAAGAGTAT GAGACCTTTC CTAGGCCTCG 
    TGTACCTTAA GGCCATGAAC GAAGATGTGT GTTTCTTCAA TGTATTCTAA 
    ATCCTGAACA TGCTAAGACT ATGTTCTCTT TCGTATGAAG AAATATTATG 
    TGTTGGTACA ATTCTAGTCC CATGTTTATG AAGTATTCTC GACTGGAGTA 
    AGCGATTAAT CTGGACGTTT CAACGGTCTT GTGTGTCTAC AGAAACAATT 
    TAGCATATTC ATCTCACTCT GACCATGTGC GTATATACGT TTTTAAGGTC 
    TCTCAAACTT GGTTGATGAT TGGAAACAAA GATCTAAATG TTGTTACAAA 
    TTCATATAAC CACTTAACTT AACCTAATCG TCTCAGGCTA TTCCTGACTT 
    CGAGTTAAGT GGATGATATA GAAATCGAGA TGTGAAGTGA TTTTCAGCCA 
    TCAAAATTTT CAAACAGCTC TATATACCTC AAAAGAAATC CAAGATGACA 
    AAAAATTGAT TTAAGGCCAA AGGAGAGAAA GATGCCAGTC AAATGTTATG 
    AAAAGACATG CTTG

AT2G38130.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator Summary
Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.
Computational Description
ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 3613 Blast hits to 3609 proteins in 1331 species: Archae - 279; Bacteria - 1857; Metazoa - 641; Fungi - 294; Plants - 213; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G38130.2

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator Summary
Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.
Computational Description
ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR