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GT22089

CSHL Arabidopsis genetrap mutant lines

Original: GT22089

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22089

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7508116 [Map]; Strand: w
      • AT3G21330.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22089 - 5-prime edge 
    TATCTGTGGT TTTCTCAGAT TGGCAGACTC TTTGGAGCTT TGGTGGAGTC 
    TCATCTGCAG AGTCTGAGAA CAGAGAGATC ACTACTGAGA CGACAACAAC 
    GATAAAGCCT AAGCCTTTGA AGAGAAACAG AGGAGGAGAT GGAGGAACTA 
    CTGGGACTAC AACAACAACA ACAACAACAA AACCTAAGTC TTTGAAGAGA 
    AACAGAGGAG ACGAGACAGG AAGTCACTTT AGTCTTGTTC ATCCTCAAGA 
    TGATTCGGAG AAAGGAGGTT TCAAGCTTAT ATACGATGAG AATCAATCGA 
    AATCAAAGAA ACCAAGAACA GAGAAAGAAC GAGGCGGTTC TTCAAACATT 
    AGTTTCCAAC ATTCAACTTG GTTGGGTGAC GATGTCGAGC CCGATGCTGA 
    GGCGATTGCA CAAATGGAGG AGATGATATA CAGAGCGGCT GCATTTAGAC 
    CGGTGAATTT CGGGTTAGAG ATTGTGGAGA AGCCTAAGAG GAAGAACGTC 
    AAGATATCGA CGGATCCCTC AAACGGTTGT GGCGAGACAG AGAAGGGAGA 
    GG

AT3G21330.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2796 Blast hits to 2791 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 6; Plants - 2786; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR