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GT22099

CSHL Arabidopsis genetrap mutant lines

Original: GT22099

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22099

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11112024 [Map]; Strand: c
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22099 - 5-prime edge 
    TTTCTCTCTG TCGACCATTG GACTAAGGCG TTGACTCGTG TGGAGCTCGA 
    AGTTGATTCG GAGTTGGTAG TTGGTTTTCT CAAGACAGGG ATCGGTGATC 
    AACATCCGCT GTCGTTCCTG GTGCGGTTGT GCCATGGCTT ATTATCGAAG 
    GACTGGATTG TCCGAATCAC TCGCGTGTAT AGGGAGGCTA ATCGTCTAGC 
    CGACGGTCTA GCTAACTATG CATTTTCTTT ACCATTAGGT TTTCATTCTC 
    TTATTGATGT TCCGGATGAT TTAGAGGTGA TTTTGCATGA GGATAGTCTT 
    GGGTCAAGGC GACCAAGACG AGTCCGGTTG TAAGCTTTGT TTTTTTTCTT 
    TTTTAATAAT ATTCCGGGAG CTTTCATCTC CCGCGGACAC ACCAAAAAAA 
    AAAAAAAAAA CCCCCCGGGT TTTAATTTTT TCGGGAAATC CCCCCCGGGG 
    CCCCCCCAAA ACCTGGGAAA ATTGACCCTG ATTTCCCCGG GCCAAAAAAA 
    AAAAAATCTG CCTTTTAAAA AAACCCCAAT TCCCTTTGGA AAATT

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR