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GT22110

CSHL Arabidopsis genetrap mutant lines

Original: GT22110

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22110

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1056227 [Map]; Strand: w
      • AT2G03490.1 - [+] show detail - pre-tRNA
        Distance: -1437; Region: intergenic
      • AT2G03500.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -3483; Region: intergenic
    Flanking Genome Sequence: GT22110 - 5-prime edge 
    ATACCTAAAA ACCCAAAATC TTTTCCAAGC TTATACATGC ACTAACATAT 
    TCGACAAAAA TGTGAAGCCA TTTTTTCTCA ATAATGCTTA TATATCACTA 
    GTAAAGCTTT AGTGCATGGT TTTAGAAATT AGGTAATACG TTTTTAAAAC 
    AAGAGATTGA ATAATAGAGA AATACAAGAA TATACCTAAG TCACTTAAAA 
    CTTATGTCAA TACTATGCAT TTTTGAAAAG CCTTTTTTCT TCTCTCTCGA 
    CCAGCAAAAG AATTCAATTT TCTTCATCTC TCTCGA

AT2G03490.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Ala (anticodon: TGC)
Link
InterPro Scan - TAIR

AT2G03500.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink).
Link
InterPro Scan - TAIR